Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ush1gQ80T11 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ush1gQ80T11 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.06■□□□□ 0.48
Ush1gQ80T11 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.05■□□□□ 0.48
Ush1gQ80T11 AW822252-206ENSMUST00000208904 237 ntBASIC18.05■□□□□ 0.48
Ush1gQ80T11 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ush1gQ80T11 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ush1gQ80T11 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.03■□□□□ 0.48
Ush1gQ80T11 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ush1gQ80T11 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.03■□□□□ 0.48
Ush1gQ80T11 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.03■□□□□ 0.48
Ush1gQ80T11 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.03■□□□□ 0.48
Ush1gQ80T11 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ush1gQ80T11 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ush1gQ80T11 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ush1gQ80T11 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ush1gQ80T11 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ush1gQ80T11 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.02■□□□□ 0.48
Ush1gQ80T11 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ush1gQ80T11 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ush1gQ80T11 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ush1gQ80T11 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms