Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf139Q7TMV1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Gm6345-202ENSMUST00000180900 204 ntBASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rnf139Q7TMV1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf139Q7TMV1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf139Q7TMV1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf139Q7TMV1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf139Q7TMV1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Rnf139Q7TMV1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf139Q7TMV1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf139Q7TMV1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf139Q7TMV1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf139Q7TMV1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf139Q7TMV1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rnf139Q7TMV1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf139Q7TMV1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf139Q7TMV1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Gm25016-201ENSMUST00000158399 131 ntBASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf139Q7TMV1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms