Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Sned1Q70E20 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sned1Q70E20 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Sned1Q70E20 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Sned1Q70E20 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sned1Q70E20 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sned1Q70E20 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sned1Q70E20 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sned1Q70E20 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Sned1Q70E20 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sned1Q70E20 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.93■□□□□ 0.78
Sned1Q70E20 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sned1Q70E20 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sned1Q70E20 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sned1Q70E20 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.93■□□□□ 0.78
Sned1Q70E20 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.93■□□□□ 0.78
Sned1Q70E20 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sned1Q70E20 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sned1Q70E20 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sned1Q70E20 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sned1Q70E20 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sned1Q70E20 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.92■□□□□ 0.78
Sned1Q70E20 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sned1Q70E20 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sned1Q70E20 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.92■□□□□ 0.78
Sned1Q70E20 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.92■□□□□ 0.78
Sned1Q70E20 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sned1Q70E20 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.92■□□□□ 0.78
Sned1Q70E20 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.92■□□□□ 0.78
Sned1Q70E20 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sned1Q70E20 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sned1Q70E20 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sned1Q70E20 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sned1Q70E20 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sned1Q70E20 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Sned1Q70E20 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sned1Q70E20 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sned1Q70E20 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.91■□□□□ 0.78
Sned1Q70E20 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Sned1Q70E20 Gm43438-201ENSMUST00000198133 379 ntBASIC19.91■□□□□ 0.78
Sned1Q70E20 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.91■□□□□ 0.78
Sned1Q70E20 Gm5312-201ENSMUST00000203728 547 ntBASIC19.91■□□□□ 0.78
Sned1Q70E20 Gm45612-201ENSMUST00000211320 160 ntBASIC19.91■□□□□ 0.78
Sned1Q70E20 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sned1Q70E20 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.91■□□□□ 0.78
Sned1Q70E20 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sned1Q70E20 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sned1Q70E20 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.9■□□□□ 0.78
Sned1Q70E20 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sned1Q70E20 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sned1Q70E20 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sned1Q70E20 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sned1Q70E20 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sned1Q70E20 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19.9■□□□□ 0.78
Sned1Q70E20 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.9■□□□□ 0.78
Sned1Q70E20 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.89■□□□□ 0.78
Sned1Q70E20 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Sned1Q70E20 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sned1Q70E20 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sned1Q70E20 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sned1Q70E20 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.89■□□□□ 0.77
Sned1Q70E20 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Sned1Q70E20 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sned1Q70E20 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Sned1Q70E20 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Sned1Q70E20 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sned1Q70E20 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sned1Q70E20 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sned1Q70E20 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.88■□□□□ 0.77
Sned1Q70E20 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sned1Q70E20 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sned1Q70E20 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sned1Q70E20 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.88■□□□□ 0.77
Sned1Q70E20 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sned1Q70E20 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sned1Q70E20 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sned1Q70E20 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sned1Q70E20 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sned1Q70E20 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.88■□□□□ 0.77
Sned1Q70E20 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.87■□□□□ 0.77
Sned1Q70E20 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sned1Q70E20 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Sned1Q70E20 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sned1Q70E20 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.87■□□□□ 0.77
Sned1Q70E20 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.87■□□□□ 0.77
Sned1Q70E20 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sned1Q70E20 Mir7023-201ENSMUST00000185093 64 ntBASIC19.87■□□□□ 0.77
Sned1Q70E20 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sned1Q70E20 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sned1Q70E20 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sned1Q70E20 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sned1Q70E20 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Sned1Q70E20 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sned1Q70E20 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Sned1Q70E20 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sned1Q70E20 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sned1Q70E20 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Sned1Q70E20 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sned1Q70E20 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sned1Q70E20 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms