Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShbQ6PD21 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.85■□□□□ 0.45
ShbQ6PD21 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ShbQ6PD21 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ShbQ6PD21 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ShbQ6PD21 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.85■□□□□ 0.45
ShbQ6PD21 Gm17968-201ENSMUST00000194902 784 ntBASIC17.85■□□□□ 0.45
ShbQ6PD21 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShbQ6PD21 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ShbQ6PD21 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShbQ6PD21 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShbQ6PD21 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.85■□□□□ 0.45
ShbQ6PD21 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShbQ6PD21 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShbQ6PD21 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShbQ6PD21 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShbQ6PD21 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShbQ6PD21 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ShbQ6PD21 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ShbQ6PD21 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ShbQ6PD21 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ShbQ6PD21 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ShbQ6PD21 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ShbQ6PD21 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ShbQ6PD21 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.84■□□□□ 0.45
ShbQ6PD21 Gm27494-201ENSMUST00000184735 189 ntBASIC17.84■□□□□ 0.45
ShbQ6PD21 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ShbQ6PD21 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ShbQ6PD21 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.84■□□□□ 0.45
ShbQ6PD21 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ShbQ6PD21 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ShbQ6PD21 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ShbQ6PD21 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ShbQ6PD21 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ShbQ6PD21 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.83■□□□□ 0.45
ShbQ6PD21 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ShbQ6PD21 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShbQ6PD21 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
ShbQ6PD21 Mir1895-201ENSMUST00000122615 79 ntBASIC17.83■□□□□ 0.44
ShbQ6PD21 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.83■□□□□ 0.44
ShbQ6PD21 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShbQ6PD21 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.83■□□□□ 0.44
ShbQ6PD21 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShbQ6PD21 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShbQ6PD21 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShbQ6PD21 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ShbQ6PD21 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShbQ6PD21 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ShbQ6PD21 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ShbQ6PD21 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.82■□□□□ 0.44
ShbQ6PD21 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ShbQ6PD21 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShbQ6PD21 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShbQ6PD21 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShbQ6PD21 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShbQ6PD21 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShbQ6PD21 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShbQ6PD21 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShbQ6PD21 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShbQ6PD21 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShbQ6PD21 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShbQ6PD21 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ShbQ6PD21 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShbQ6PD21 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShbQ6PD21 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.81■□□□□ 0.44
ShbQ6PD21 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ShbQ6PD21 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ShbQ6PD21 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ShbQ6PD21 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ShbQ6PD21 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ShbQ6PD21 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ShbQ6PD21 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ShbQ6PD21 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ShbQ6PD21 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.8■□□□□ 0.44
ShbQ6PD21 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ShbQ6PD21 Gm36967-201ENSMUST00000193814 266 ntBASIC17.8■□□□□ 0.44
ShbQ6PD21 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ShbQ6PD21 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.8■□□□□ 0.44
ShbQ6PD21 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.8■□□□□ 0.44
ShbQ6PD21 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.8■□□□□ 0.44
ShbQ6PD21 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ShbQ6PD21 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.8■□□□□ 0.44
ShbQ6PD21 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ShbQ6PD21 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms