Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Abcf1Q6P542 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.53■□□□□ 0.56
Abcf1Q6P542 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Gm5417-201ENSMUST00000079706 384 ntBASIC18.53■□□□□ 0.56
Abcf1Q6P542 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Abcf1Q6P542 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Abcf1Q6P542 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.52■□□□□ 0.56
Abcf1Q6P542 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Abcf1Q6P542 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.52■□□□□ 0.56
Abcf1Q6P542 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.52■□□□□ 0.56
Abcf1Q6P542 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Abcf1Q6P542 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.52■□□□□ 0.56
Abcf1Q6P542 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.52■□□□□ 0.56
Abcf1Q6P542 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Abcf1Q6P542 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Abcf1Q6P542 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Abcf1Q6P542 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.52■□□□□ 0.56
Abcf1Q6P542 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.52■□□□□ 0.56
Abcf1Q6P542 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Abcf1Q6P542 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Abcf1Q6P542 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Abcf1Q6P542 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Abcf1Q6P542 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Abcf1Q6P542 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Gm4974-201ENSMUST00000209974 875 ntBASIC18.51■□□□□ 0.55
Abcf1Q6P542 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Abcf1Q6P542 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Abcf1Q6P542 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Abcf1Q6P542 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abcf1Q6P542 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms