Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.24□□□□□ -0.45
Ss18Q62280 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.24□□□□□ -0.45
Ss18Q62280 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ss18Q62280 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ss18Q62280 Gm15378-201ENSMUST00000121894 207 ntBASIC12.24□□□□□ -0.45
Ss18Q62280 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ss18Q62280 Gm37292-201ENSMUST00000192062 758 ntBASIC12.24□□□□□ -0.45
Ss18Q62280 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ss18Q62280 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ss18Q62280 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ss18Q62280 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ss18Q62280 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.24□□□□□ -0.45
Ss18Q62280 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ss18Q62280 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ss18Q62280 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ss18Q62280 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ss18Q62280 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ss18Q62280 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ss18Q62280 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ss18Q62280 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ss18Q62280 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ss18Q62280 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Ss18Q62280 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ss18Q62280 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ss18Q62280 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ss18Q62280 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ss18Q62280 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ss18Q62280 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ss18Q62280 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ss18Q62280 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.23□□□□□ -0.45
Ss18Q62280 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.23□□□□□ -0.45
Ss18Q62280 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.23□□□□□ -0.45
Ss18Q62280 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ss18Q62280 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ss18Q62280 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ss18Q62280 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.22□□□□□ -0.45
Ss18Q62280 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.22□□□□□ -0.45
Ss18Q62280 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.22□□□□□ -0.45
Ss18Q62280 Gm37856-201ENSMUST00000191634 999 ntBASIC12.22□□□□□ -0.45
Ss18Q62280 Gm43183-201ENSMUST00000200632 547 ntBASIC12.22□□□□□ -0.45
Ss18Q62280 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.22□□□□□ -0.45
Ss18Q62280 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.22□□□□□ -0.45
Ss18Q62280 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.22□□□□□ -0.45
Ss18Q62280 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ss18Q62280 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ss18Q62280 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ss18Q62280 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ss18Q62280 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ss18Q62280 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ss18Q62280 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ss18Q62280 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ss18Q62280 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ss18Q62280 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ss18Q62280 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ss18Q62280 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ss18Q62280 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ss18Q62280 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ss18Q62280 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ss18Q62280 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ss18Q62280 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms