Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Notch3Q61982 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Notch3Q61982 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.69□□□□□ -0.38
Notch3Q61982 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.69□□□□□ -0.38
Notch3Q61982 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Notch3Q61982 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Notch3Q61982 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Notch3Q61982 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.68□□□□□ -0.38
Notch3Q61982 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.68□□□□□ -0.38
Notch3Q61982 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.68□□□□□ -0.38
Notch3Q61982 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Notch3Q61982 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
Notch3Q61982 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.68□□□□□ -0.38
Notch3Q61982 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.68□□□□□ -0.38
Notch3Q61982 Gm18195-201ENSMUST00000207604 706 ntBASIC12.68□□□□□ -0.38
Notch3Q61982 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Notch3Q61982 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Gm27525-201ENSMUST00000184465 107 ntBASIC12.67□□□□□ -0.38
Notch3Q61982 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.67□□□□□ -0.38
Notch3Q61982 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Notch3Q61982 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Notch3Q61982 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Notch3Q61982 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.67□□□□□ -0.38
Notch3Q61982 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.67□□□□□ -0.38
Notch3Q61982 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Notch3Q61982 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.67□□□□□ -0.38
Notch3Q61982 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Notch3Q61982 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Notch3Q61982 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Notch3Q61982 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Notch3Q61982 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.66□□□□□ -0.38
Notch3Q61982 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Notch3Q61982 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Notch3Q61982 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms