Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.17□□□□□ -0.46
Foxc1Q61572 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxc1Q61572 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxc1Q61572 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Foxc1Q61572 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxc1Q61572 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxc1Q61572 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Foxc1Q61572 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxc1Q61572 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Foxc1Q61572 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Foxc1Q61572 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Foxc1Q61572 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Foxc1Q61572 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Foxc1Q61572 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Foxc1Q61572 AA414768-201ENSMUST00000121924 1257 ntBASIC12.16□□□□□ -0.46
Foxc1Q61572 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.16□□□□□ -0.46
Foxc1Q61572 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Gm23634-201ENSMUST00000175071 91 ntBASIC12.16□□□□□ -0.46
Foxc1Q61572 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC12.16□□□□□ -0.46
Foxc1Q61572 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Foxc1Q61572 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.16□□□□□ -0.46
Foxc1Q61572 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Gm10819-201ENSMUST00000099988 561 ntBASIC12.16□□□□□ -0.46
Foxc1Q61572 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Foxc1Q61572 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Foxc1Q61572 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxc1Q61572 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.15□□□□□ -0.46
Foxc1Q61572 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Foxc1Q61572 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.15□□□□□ -0.46
Foxc1Q61572 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.15□□□□□ -0.46
Foxc1Q61572 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.15□□□□□ -0.46
Foxc1Q61572 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC12.15□□□□□ -0.46
Foxc1Q61572 Gm45058-201ENSMUST00000205810 766 ntBASIC12.15□□□□□ -0.46
Foxc1Q61572 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Foxc1Q61572 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.15□□□□□ -0.46
Foxc1Q61572 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Foxc1Q61572 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Foxc1Q61572 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.14□□□□□ -0.47
Foxc1Q61572 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Foxc1Q61572 Gm14859-201ENSMUST00000117752 357 ntBASIC12.14□□□□□ -0.47
Foxc1Q61572 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Gm18958-201ENSMUST00000174258 762 ntBASIC12.14□□□□□ -0.47
Foxc1Q61572 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.14□□□□□ -0.47
Foxc1Q61572 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.14□□□□□ -0.47
Foxc1Q61572 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Foxc1Q61572 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Foxc1Q61572 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.14□□□□□ -0.47
Foxc1Q61572 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.14□□□□□ -0.47
Foxc1Q61572 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Foxc1Q61572 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms