Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ecm1Q61508 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ecm1Q61508 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
Ecm1Q61508 Gm5264-201ENSMUST00000190584 848 ntBASIC18.29■□□□□ 0.52
Ecm1Q61508 Gm36967-201ENSMUST00000193814 266 ntBASIC18.29■□□□□ 0.52
Ecm1Q61508 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.29■□□□□ 0.52
Ecm1Q61508 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.29■□□□□ 0.52
Ecm1Q61508 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.29■□□□□ 0.52
Ecm1Q61508 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.29■□□□□ 0.52
Ecm1Q61508 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ecm1Q61508 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ecm1Q61508 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ecm1Q61508 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ecm1Q61508 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.29■□□□□ 0.52
Ecm1Q61508 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ecm1Q61508 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.28■□□□□ 0.52
Ecm1Q61508 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ecm1Q61508 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ecm1Q61508 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ecm1Q61508 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.28■□□□□ 0.52
Ecm1Q61508 Gm11780-201ENSMUST00000136880 516 ntBASIC18.28■□□□□ 0.52
Ecm1Q61508 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.28■□□□□ 0.52
Ecm1Q61508 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.28■□□□□ 0.52
Ecm1Q61508 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ecm1Q61508 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ecm1Q61508 AV026068-213ENSMUST00000223675 1171 ntBASIC18.28■□□□□ 0.52
Ecm1Q61508 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.28■□□□□ 0.52
Ecm1Q61508 Gm15590-201ENSMUST00000078419 552 ntBASIC18.28■□□□□ 0.52
Ecm1Q61508 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ecm1Q61508 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ecm1Q61508 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ecm1Q61508 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ecm1Q61508 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ecm1Q61508 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ecm1Q61508 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ecm1Q61508 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ecm1Q61508 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ecm1Q61508 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ecm1Q61508 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ecm1Q61508 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ecm1Q61508 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.27■□□□□ 0.52
Ecm1Q61508 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.27■□□□□ 0.52
Ecm1Q61508 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ecm1Q61508 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ecm1Q61508 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ecm1Q61508 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ecm1Q61508 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ecm1Q61508 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ecm1Q61508 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ecm1Q61508 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ecm1Q61508 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ecm1Q61508 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ecm1Q61508 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ecm1Q61508 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ecm1Q61508 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ecm1Q61508 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ecm1Q61508 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ecm1Q61508 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ecm1Q61508 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ecm1Q61508 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ecm1Q61508 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ecm1Q61508 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Ecm1Q61508 Gm15467-201ENSMUST00000120582 445 ntBASIC18.26■□□□□ 0.51
Ecm1Q61508 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ecm1Q61508 Gm6550-201ENSMUST00000187574 993 ntBASIC18.26■□□□□ 0.51
Ecm1Q61508 Gm9172-201ENSMUST00000212092 954 ntBASIC18.26■□□□□ 0.51
Ecm1Q61508 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ecm1Q61508 Gm8655-201ENSMUST00000221159 852 ntBASIC18.26■□□□□ 0.51
Ecm1Q61508 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ecm1Q61508 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ecm1Q61508 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ecm1Q61508 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Ecm1Q61508 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ecm1Q61508 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ecm1Q61508 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ecm1Q61508 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ecm1Q61508 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ecm1Q61508 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ecm1Q61508 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Ecm1Q61508 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ecm1Q61508 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ecm1Q61508 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ecm1Q61508 Gm2213-201ENSMUST00000197485 688 ntBASIC18.25■□□□□ 0.51
Ecm1Q61508 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.25■□□□□ 0.51
Ecm1Q61508 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ecm1Q61508 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.25■□□□□ 0.51
Ecm1Q61508 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.25■□□□□ 0.51
Ecm1Q61508 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ecm1Q61508 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ecm1Q61508 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ecm1Q61508 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ecm1Q61508 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ecm1Q61508 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ecm1Q61508 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ecm1Q61508 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ecm1Q61508 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ecm1Q61508 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ecm1Q61508 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ecm1Q61508 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Ecm1Q61508 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms