Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.46■□□□□ 0.55
Col11a1Q61245 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a1Q61245 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a1Q61245 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a1Q61245 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a1Q61245 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a1Q61245 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a1Q61245 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a1Q61245 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a1Q61245 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.46■□□□□ 0.55
Col11a1Q61245 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.46■□□□□ 0.55
Col11a1Q61245 Gm27494-201ENSMUST00000184735 189 ntBASIC18.46■□□□□ 0.55
Col11a1Q61245 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a1Q61245 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.46■□□□□ 0.55
Col11a1Q61245 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Col11a1Q61245 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a1Q61245 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a1Q61245 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.45■□□□□ 0.54
Col11a1Q61245 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a1Q61245 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Col11a1Q61245 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a1Q61245 Gm11025-201ENSMUST00000140773 466 ntBASIC18.45■□□□□ 0.54
Col11a1Q61245 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.45■□□□□ 0.54
Col11a1Q61245 Gm5312-201ENSMUST00000203728 547 ntBASIC18.45■□□□□ 0.54
Col11a1Q61245 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a1Q61245 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.45■□□□□ 0.54
Col11a1Q61245 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a1Q61245 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a1Q61245 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a1Q61245 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Col11a1Q61245 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.45■□□□□ 0.54
Col11a1Q61245 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
Col11a1Q61245 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Col11a1Q61245 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a1Q61245 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a1Q61245 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a1Q61245 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.44■□□□□ 0.54
Col11a1Q61245 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.44■□□□□ 0.54
Col11a1Q61245 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Col11a1Q61245 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a1Q61245 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a1Q61245 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a1Q61245 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a1Q61245 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Col11a1Q61245 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a1Q61245 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Col11a1Q61245 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a1Q61245 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.44■□□□□ 0.54
Col11a1Q61245 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Col11a1Q61245 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a1Q61245 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a1Q61245 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.44■□□□□ 0.54
Col11a1Q61245 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Col11a1Q61245 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a1Q61245 Gm8396-201ENSMUST00000057361 823 ntBASIC18.44■□□□□ 0.54
Col11a1Q61245 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col11a1Q61245 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col11a1Q61245 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col11a1Q61245 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col11a1Q61245 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Col11a1Q61245 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col11a1Q61245 Gm8825-201ENSMUST00000182565 998 ntBASIC18.43■□□□□ 0.54
Col11a1Q61245 Gm44335-201ENSMUST00000196879 141 ntBASIC18.43■□□□□ 0.54
Col11a1Q61245 Gm44297-201ENSMUST00000198304 141 ntBASIC18.43■□□□□ 0.54
Col11a1Q61245 Gm44346-201ENSMUST00000198851 141 ntBASIC18.43■□□□□ 0.54
Col11a1Q61245 Gm5186-201ENSMUST00000218781 920 ntBASIC18.43■□□□□ 0.54
Col11a1Q61245 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col11a1Q61245 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col11a1Q61245 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col11a1Q61245 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col11a1Q61245 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.43■□□□□ 0.54
Col11a1Q61245 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col11a1Q61245 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col11a1Q61245 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col11a1Q61245 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col11a1Q61245 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col11a1Q61245 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Col11a1Q61245 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.42■□□□□ 0.54
Col11a1Q61245 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.42■□□□□ 0.54
Col11a1Q61245 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col11a1Q61245 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.42■□□□□ 0.54
Col11a1Q61245 Gm43125-201ENSMUST00000201724 730 ntBASIC18.42■□□□□ 0.54
Col11a1Q61245 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col11a1Q61245 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.42■□□□□ 0.54
Col11a1Q61245 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col11a1Q61245 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col11a1Q61245 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.42■□□□□ 0.54
Col11a1Q61245 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col11a1Q61245 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.42■□□□□ 0.54
Col11a1Q61245 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.42■□□□□ 0.54
Col11a1Q61245 Gm37153-201ENSMUST00000193637 231 ntBASIC18.42■□□□□ 0.54
Col11a1Q61245 Gm44492-201ENSMUST00000197012 141 ntBASIC18.42■□□□□ 0.54
Col11a1Q61245 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col11a1Q61245 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.42■□□□□ 0.54
Col11a1Q61245 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col11a1Q61245 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col11a1Q61245 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col11a1Q61245 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col11a1Q61245 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col11a1Q61245 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms