Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cln3Q61124 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cln3Q61124 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cln3Q61124 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cln3Q61124 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cln3Q61124 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cln3Q61124 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cln3Q61124 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cln3Q61124 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cln3Q61124 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cln3Q61124 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cln3Q61124 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cln3Q61124 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cln3Q61124 Gm8097-201ENSMUST00000117903 829 ntBASIC18.09■□□□□ 0.49
Cln3Q61124 Gm11780-201ENSMUST00000136880 516 ntBASIC18.09■□□□□ 0.49
Cln3Q61124 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.09■□□□□ 0.49
Cln3Q61124 Gm5264-201ENSMUST00000190584 848 ntBASIC18.09■□□□□ 0.49
Cln3Q61124 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.09■□□□□ 0.49
Cln3Q61124 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cln3Q61124 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cln3Q61124 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cln3Q61124 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cln3Q61124 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cln3Q61124 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Cln3Q61124 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cln3Q61124 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cln3Q61124 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cln3Q61124 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Cln3Q61124 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cln3Q61124 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cln3Q61124 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cln3Q61124 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Cln3Q61124 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cln3Q61124 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cln3Q61124 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cln3Q61124 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cln3Q61124 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cln3Q61124 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Cln3Q61124 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.08■□□□□ 0.48
Cln3Q61124 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cln3Q61124 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
Cln3Q61124 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cln3Q61124 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.08■□□□□ 0.48
Cln3Q61124 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cln3Q61124 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cln3Q61124 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Cln3Q61124 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
Cln3Q61124 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cln3Q61124 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cln3Q61124 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.08■□□□□ 0.48
Cln3Q61124 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
Cln3Q61124 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cln3Q61124 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cln3Q61124 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cln3Q61124 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cln3Q61124 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cln3Q61124 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.07■□□□□ 0.48
Cln3Q61124 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.07■□□□□ 0.48
Cln3Q61124 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cln3Q61124 Gm36967-201ENSMUST00000193814 266 ntBASIC18.07■□□□□ 0.48
Cln3Q61124 Gm6089-201ENSMUST00000197666 938 ntBASIC18.07■□□□□ 0.48
Cln3Q61124 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.07■□□□□ 0.48
Cln3Q61124 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cln3Q61124 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.07■□□□□ 0.48
Cln3Q61124 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cln3Q61124 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cln3Q61124 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Cln3Q61124 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cln3Q61124 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cln3Q61124 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cln3Q61124 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cln3Q61124 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cln3Q61124 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cln3Q61124 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cln3Q61124 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cln3Q61124 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.06■□□□□ 0.48
Cln3Q61124 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cln3Q61124 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.06■□□□□ 0.48
Cln3Q61124 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cln3Q61124 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cln3Q61124 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cln3Q61124 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Cln3Q61124 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Cln3Q61124 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.06■□□□□ 0.48
Cln3Q61124 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cln3Q61124 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.06■□□□□ 0.48
Cln3Q61124 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cln3Q61124 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.06■□□□□ 0.48
Cln3Q61124 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cln3Q61124 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cln3Q61124 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cln3Q61124 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cln3Q61124 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cln3Q61124 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cln3Q61124 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cln3Q61124 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cln3Q61124 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cln3Q61124 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cln3Q61124 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cln3Q61124 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms