Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.79■□□□□ 0.28
Sdf4Q61112 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdf4Q61112 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sdf4Q61112 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.78■□□□□ 0.28
Sdf4Q61112 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sdf4Q61112 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Gm10231-201ENSMUST00000181584 441 ntBASIC16.78■□□□□ 0.28
Sdf4Q61112 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Gm10175-202ENSMUST00000208752 441 ntBASIC16.78■□□□□ 0.28
Sdf4Q61112 Gm21559-201ENSMUST00000220638 855 ntBASIC16.78■□□□□ 0.28
Sdf4Q61112 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Gm8587-201ENSMUST00000076538 843 ntBASIC16.78■□□□□ 0.28
Sdf4Q61112 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.78■□□□□ 0.28
Sdf4Q61112 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.78■□□□□ 0.28
Sdf4Q61112 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdf4Q61112 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdf4Q61112 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.77■□□□□ 0.28
Sdf4Q61112 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdf4Q61112 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Sdf4Q61112 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdf4Q61112 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdf4Q61112 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdf4Q61112 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.77■□□□□ 0.28
Sdf4Q61112 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdf4Q61112 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Sdf4Q61112 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.77■□□□□ 0.28
Sdf4Q61112 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdf4Q61112 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdf4Q61112 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdf4Q61112 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdf4Q61112 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sdf4Q61112 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sdf4Q61112 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sdf4Q61112 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Sdf4Q61112 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sdf4Q61112 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.76■□□□□ 0.27
Sdf4Q61112 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.76■□□□□ 0.27
Sdf4Q61112 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdf4Q61112 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdf4Q61112 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdf4Q61112 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sdf4Q61112 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdf4Q61112 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdf4Q61112 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sdf4Q61112 Gm11336-201ENSMUST00000118168 334 ntBASIC16.76■□□□□ 0.27
Sdf4Q61112 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sdf4Q61112 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.76■□□□□ 0.27
Sdf4Q61112 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.76■□□□□ 0.27
Sdf4Q61112 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdf4Q61112 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdf4Q61112 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.76■□□□□ 0.27
Sdf4Q61112 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sdf4Q61112 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdf4Q61112 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdf4Q61112 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sdf4Q61112 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdf4Q61112 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdf4Q61112 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sdf4Q61112 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdf4Q61112 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdf4Q61112 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.75■□□□□ 0.27
Sdf4Q61112 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.75■□□□□ 0.27
Sdf4Q61112 Gm44450-201ENSMUST00000199528 114 ntBASIC16.75■□□□□ 0.27
Sdf4Q61112 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.75■□□□□ 0.27
Sdf4Q61112 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sdf4Q61112 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms