Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Gm38285-201ENSMUST00000192928 922 ntBASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pabpn1lQ5XFR0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pabpn1lQ5XFR0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pabpn1lQ5XFR0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpn1lQ5XFR0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms