Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-2Q5R1I4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-2Q5R1I4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-2Q5R1I4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-2Q5R1I4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav6-2Q5R1I4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-2Q5R1I4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-2Q5R1I4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-2Q5R1I4 Gm6376-201ENSMUST00000209407 580 ntBASIC14.52□□□□□ -0.09
Trav6-2Q5R1I4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-2Q5R1I4 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.52□□□□□ -0.09
Trav6-2Q5R1I4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-2Q5R1I4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-2Q5R1I4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-2Q5R1I4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-2Q5R1I4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav6-2Q5R1I4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6-2Q5R1I4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.52□□□□□ -0.09
Trav6-2Q5R1I4 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.52□□□□□ -0.09
Trav6-2Q5R1I4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6-2Q5R1I4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-2Q5R1I4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-2Q5R1I4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms