Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav8d-1Q5R1H8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Gm11249-201ENSMUST00000117071 859 ntBASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Gm22240-201ENSMUST00000175225 82 ntBASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav8d-1Q5R1H8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav8d-1Q5R1H8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav8d-1Q5R1H8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav8d-1Q5R1H8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav8d-1Q5R1H8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms