Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5d-4Q5R1F6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5d-4Q5R1F6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Gm11539-201ENSMUST00000119837 557 ntBASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Gm13436-201ENSMUST00000120418 567 ntBASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5d-4Q5R1F6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Gm7370-201ENSMUST00000219471 767 ntBASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5d-4Q5R1F6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5d-4Q5R1F6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav5d-4Q5R1F6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5d-4Q5R1F6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5d-4Q5R1F6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav5d-4Q5R1F6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5d-4Q5R1F6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5d-4Q5R1F6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5d-4Q5R1F6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5d-4Q5R1F6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav5d-4Q5R1F6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav5d-4Q5R1F6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav5d-4Q5R1F6 Gm2274-201ENSMUST00000184539 609 ntBASIC14.21□□□□□ -0.13
Trav5d-4Q5R1F6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms