Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf20Q5DTM8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf20Q5DTM8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Gm6433-201ENSMUST00000118634 875 ntBASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Rnf20Q5DTM8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Gm44450-201ENSMUST00000199528 114 ntBASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf20Q5DTM8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Gm10566-201ENSMUST00000086739 996 ntBASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf20Q5DTM8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 Gm26039-201ENSMUST00000158152 144 ntBASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.65■□□□□ 0.74
Rnf20Q5DTM8 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms