Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rc3h1Q4VGL6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Rc3h1Q4VGL6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rc3h1Q4VGL6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rc3h1Q4VGL6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rc3h1Q4VGL6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Gm27459-201ENSMUST00000184860 107 ntBASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rc3h1Q4VGL6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rc3h1Q4VGL6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rc3h1Q4VGL6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rc3h1Q4VGL6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rc3h1Q4VGL6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.06■□□□□ 0.64
Rc3h1Q4VGL6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rc3h1Q4VGL6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rc3h1Q4VGL6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rc3h1Q4VGL6 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.06■□□□□ 0.64
Rc3h1Q4VGL6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Gm15372-201ENSMUST00000120729 834 ntBASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rc3h1Q4VGL6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rc3h1Q4VGL6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Gm27867-201ENSMUST00000184778 125 ntBASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.03■□□□□ 0.64
Rc3h1Q4VGL6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.02■□□□□ 0.64
Rc3h1Q4VGL6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms