Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc2Q4U2R1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Gm45167-201ENSMUST00000208007 322 ntBASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Gm7730-201ENSMUST00000212486 454 ntBASIC9.81□□□□□ -0.84
Herc2Q4U2R1 AC132863.2-201ENSMUST00000226643 799 ntBASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Gm15743-202ENSMUST00000182690 1901 ntBASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Gm23984-201ENSMUST00000157139 203 ntBASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Mir8102-201ENSMUST00000184148 139 ntBASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Gm28631-201ENSMUST00000190740 334 ntBASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Gm5628-201ENSMUST00000222318 1049 ntBASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Gfra2-202ENSMUST00000227633 1480 ntBASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc2Q4U2R1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Gm15321-201ENSMUST00000121290 288 ntBASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Gm6745-201ENSMUST00000199216 526 ntBASIC9.8□□□□□ -0.84
Herc2Q4U2R1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Gm11425-201ENSMUST00000119608 498 ntBASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Gm7507-201ENSMUST00000183053 1008 ntBASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Gm37748-201ENSMUST00000194379 1140 ntBASIC9.8□□□□□ -0.84
Herc2Q4U2R1 AC147366.1-201ENSMUST00000227671 852 ntBASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Gm9396-201ENSMUST00000076703 567 ntBASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Gm3365-201ENSMUST00000216296 1480 ntBASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Gm37277-201ENSMUST00000194052 1111 ntBASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Gm11478-201ENSMUST00000117851 599 ntBASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Herc2Q4U2R1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Herc2Q4U2R1 Grk6-207ENSMUST00000225925 2769 ntBASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms