Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cnga4Q3UW12 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Gm2559-201ENSMUST00000201323 363 ntBASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Cnga4Q3UW12 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.84■□□□□ 0.29
Cnga4Q3UW12 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cnga4Q3UW12 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Cnga4Q3UW12 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cnga4Q3UW12 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cnga4Q3UW12 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cnga4Q3UW12 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.83■□□□□ 0.28
Cnga4Q3UW12 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cnga4Q3UW12 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Cnga4Q3UW12 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cnga4Q3UW12 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cnga4Q3UW12 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cnga4Q3UW12 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.83■□□□□ 0.28
Cnga4Q3UW12 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cnga4Q3UW12 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Cnga4Q3UW12 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cnga4Q3UW12 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cnga4Q3UW12 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cnga4Q3UW12 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cnga4Q3UW12 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cnga4Q3UW12 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cnga4Q3UW12 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cnga4Q3UW12 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cnga4Q3UW12 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cnga4Q3UW12 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cnga4Q3UW12 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.82■□□□□ 0.28
Cnga4Q3UW12 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cnga4Q3UW12 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.82■□□□□ 0.28
Cnga4Q3UW12 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cnga4Q3UW12 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms