Protein–RNA interactions for Protein: Q3UJV1

Ccdc61, Coiled-coil domain-containing protein 61, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc61Q3UJV1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc61Q3UJV1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc61Q3UJV1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc61Q3UJV1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Gm13312-201ENSMUST00000119631 718 ntBASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Rprl3-201ENSMUST00000157400 290 ntBASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc61Q3UJV1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc61Q3UJV1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Gm15372-201ENSMUST00000120729 834 ntBASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc61Q3UJV1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Gm12895-201ENSMUST00000122214 226 ntBASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc61Q3UJV1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc61Q3UJV1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc61Q3UJV1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ccdc61Q3UJV1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc61Q3UJV1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Ccdc61Q3UJV1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc61Q3UJV1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ccdc61Q3UJV1 Gm7153-201ENSMUST00000117092 455 ntBASIC17.08■□□□□ 0.32
Ccdc61Q3UJV1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.08■□□□□ 0.32
Ccdc61Q3UJV1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc61Q3UJV1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms