Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cul4aQ3TCH7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cul4aQ3TCH7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cul4aQ3TCH7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Cul4aQ3TCH7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cul4aQ3TCH7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cul4aQ3TCH7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.36■□□□□ 0.37
Cul4aQ3TCH7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cul4aQ3TCH7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cul4aQ3TCH7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cul4aQ3TCH7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cul4aQ3TCH7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cul4aQ3TCH7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cul4aQ3TCH7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cul4aQ3TCH7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 Phf7-203ENSMUST00000226565 1971 ntBASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cul4aQ3TCH7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cul4aQ3TCH7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cul4aQ3TCH7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cul4aQ3TCH7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cul4aQ3TCH7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms