Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim63Q38HM4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim63Q38HM4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim63Q38HM4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim63Q38HM4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim63Q38HM4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim63Q38HM4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim63Q38HM4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trim63Q38HM4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.73□□□□□ -0.21
Trim63Q38HM4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim63Q38HM4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim63Q38HM4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim63Q38HM4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim63Q38HM4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim63Q38HM4 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim63Q38HM4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.72□□□□□ -0.21
Trim63Q38HM4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.72□□□□□ -0.21
Trim63Q38HM4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim63Q38HM4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trim63Q38HM4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim63Q38HM4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim63Q38HM4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Trim63Q38HM4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trim63Q38HM4 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.71□□□□□ -0.21
Trim63Q38HM4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim63Q38HM4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim63Q38HM4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim63Q38HM4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim63Q38HM4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.71□□□□□ -0.21
Trim63Q38HM4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trim63Q38HM4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim63Q38HM4 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim63Q38HM4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim63Q38HM4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim63Q38HM4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim63Q38HM4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim63Q38HM4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trim63Q38HM4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim63Q38HM4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim63Q38HM4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim63Q38HM4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trim63Q38HM4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim63Q38HM4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim63Q38HM4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim63Q38HM4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim63Q38HM4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trim63Q38HM4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim63Q38HM4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.7□□□□□ -0.22
Trim63Q38HM4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.7□□□□□ -0.22
Trim63Q38HM4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim63Q38HM4 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.69□□□□□ -0.22
Trim63Q38HM4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms