Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col10a1Q05306 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col10a1Q05306 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col10a1Q05306 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col10a1Q05306 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col10a1Q05306 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.26■□□□□ 0.03
Col10a1Q05306 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col10a1Q05306 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Col10a1Q05306 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col10a1Q05306 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Col10a1Q05306 Gm11355-201ENSMUST00000121120 306 ntBASIC15.26■□□□□ 0.03
Col10a1Q05306 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.26■□□□□ 0.03
Col10a1Q05306 Gm6659-201ENSMUST00000174752 547 ntBASIC15.26■□□□□ 0.03
Col10a1Q05306 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.26■□□□□ 0.03
Col10a1Q05306 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col10a1Q05306 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col10a1Q05306 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col10a1Q05306 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col10a1Q05306 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Col10a1Q05306 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.25■□□□□ 0.03
Col10a1Q05306 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col10a1Q05306 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col10a1Q05306 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col10a1Q05306 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col10a1Q05306 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.25■□□□□ 0.03
Col10a1Q05306 Gm37722-201ENSMUST00000193757 208 ntBASIC15.25■□□□□ 0.03
Col10a1Q05306 Gm44450-201ENSMUST00000199528 114 ntBASIC15.25■□□□□ 0.03
Col10a1Q05306 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.25■□□□□ 0.03
Col10a1Q05306 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col10a1Q05306 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col10a1Q05306 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col10a1Q05306 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col10a1Q05306 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col10a1Q05306 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col10a1Q05306 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col10a1Q05306 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col10a1Q05306 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col10a1Q05306 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col10a1Q05306 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Col10a1Q05306 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.24■□□□□ 0.03
Col10a1Q05306 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.24■□□□□ 0.03
Col10a1Q05306 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col10a1Q05306 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col10a1Q05306 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col10a1Q05306 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col10a1Q05306 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col10a1Q05306 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.24■□□□□ 0.03
Col10a1Q05306 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col10a1Q05306 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col10a1Q05306 Gm23634-201ENSMUST00000175071 91 ntBASIC15.24■□□□□ 0.03
Col10a1Q05306 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col10a1Q05306 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col10a1Q05306 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col10a1Q05306 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col10a1Q05306 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col10a1Q05306 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col10a1Q05306 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col10a1Q05306 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.24■□□□□ 0.03
Col10a1Q05306 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col10a1Q05306 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col10a1Q05306 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col10a1Q05306 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col10a1Q05306 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Col10a1Q05306 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Col10a1Q05306 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.23■□□□□ 0.03
Col10a1Q05306 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.23■□□□□ 0.03
Col10a1Q05306 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col10a1Q05306 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col10a1Q05306 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col10a1Q05306 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.22■□□□□ 0.03
Col10a1Q05306 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.22■□□□□ 0.03
Col10a1Q05306 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col10a1Q05306 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col10a1Q05306 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.22■□□□□ 0.03
Col10a1Q05306 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col10a1Q05306 Gm18421-201ENSMUST00000204122 625 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms