Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.3□□□□□ -0.6
PrkdcP97313 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.3□□□□□ -0.6
PrkdcP97313 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.3□□□□□ -0.6
PrkdcP97313 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
PrkdcP97313 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
PrkdcP97313 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.29□□□□□ -0.6
PrkdcP97313 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
PrkdcP97313 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
PrkdcP97313 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
PrkdcP97313 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
PrkdcP97313 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
PrkdcP97313 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.29□□□□□ -0.6
PrkdcP97313 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.29□□□□□ -0.6
PrkdcP97313 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 Gm10616-201ENSMUST00000205285 2127 ntBASIC11.29□□□□□ -0.6
PrkdcP97313 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PrkdcP97313 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.29□□□□□ -0.6
PrkdcP97313 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC11.29□□□□□ -0.6
PrkdcP97313 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.28□□□□□ -0.6
PrkdcP97313 Gm11745-201ENSMUST00000121669 448 ntBASIC11.28□□□□□ -0.6
PrkdcP97313 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PrkdcP97313 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PrkdcP97313 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
PrkdcP97313 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PrkdcP97313 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
PrkdcP97313 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PrkdcP97313 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
PrkdcP97313 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PrkdcP97313 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.28□□□□□ -0.6
PrkdcP97313 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PrkdcP97313 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PrkdcP97313 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
PrkdcP97313 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PrkdcP97313 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
PrkdcP97313 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PrkdcP97313 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PrkdcP97313 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PrkdcP97313 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.28□□□□□ -0.6
PrkdcP97313 Gm27306-201ENSMUST00000183970 107 ntBASIC11.28□□□□□ -0.6
PrkdcP97313 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PrkdcP97313 Gm43125-201ENSMUST00000201724 730 ntBASIC11.28□□□□□ -0.6
PrkdcP97313 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.27□□□□□ -0.6
PrkdcP97313 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.27□□□□□ -0.6
PrkdcP97313 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
PrkdcP97313 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
PrkdcP97313 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.27□□□□□ -0.6
PrkdcP97313 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
PrkdcP97313 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.27□□□□□ -0.61
PrkdcP97313 Rprl2-201ENSMUST00000157150 290 ntBASIC11.27□□□□□ -0.61
PrkdcP97313 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PrkdcP97313 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PrkdcP97313 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PrkdcP97313 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PrkdcP97313 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PrkdcP97313 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PrkdcP97313 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
PrkdcP97313 Gm5177-201ENSMUST00000183092 997 ntBASIC11.27□□□□□ -0.61
PrkdcP97313 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PrkdcP97313 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PrkdcP97313 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.26□□□□□ -0.61
PrkdcP97313 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
PrkdcP97313 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkdcP97313 Gm22065-201ENSMUST00000103753 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm22066-201ENSMUST00000103761 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm24932-201ENSMUST00000103763 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm24115-201ENSMUST00000103799 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm22190-201ENSMUST00000103827 110 ntBASIC11.26□□□□□ -0.61
PrkdcP97313 Gm22191-201ENSMUST00000103831 110 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms