Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim4P70271 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim4P70271 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.77□□□□□ -0.21
Pdlim4P70271 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Pdlim4P70271 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim4P70271 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim4P70271 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pdlim4P70271 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.77□□□□□ -0.21
Pdlim4P70271 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim4P70271 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pdlim4P70271 Gm18101-201ENSMUST00000215769 548 ntBASIC13.77□□□□□ -0.21
Pdlim4P70271 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim4P70271 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim4P70271 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim4P70271 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim4P70271 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim4P70271 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim4P70271 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim4P70271 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pdlim4P70271 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim4P70271 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim4P70271 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim4P70271 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim4P70271 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim4P70271 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim4P70271 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.76□□□□□ -0.21
Pdlim4P70271 Gm22697-201ENSMUST00000175194 63 ntBASIC13.76□□□□□ -0.21
Pdlim4P70271 Gm27389-201ENSMUST00000183622 195 ntBASIC13.76□□□□□ -0.21
Pdlim4P70271 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Pdlim4P70271 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim4P70271 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim4P70271 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim4P70271 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pdlim4P70271 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim4P70271 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim4P70271 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pdlim4P70271 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim4P70271 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim4P70271 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim4P70271 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.75□□□□□ -0.21
Pdlim4P70271 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pdlim4P70271 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.75□□□□□ -0.21
Pdlim4P70271 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pdlim4P70271 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pdlim4P70271 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.75□□□□□ -0.21
Pdlim4P70271 Mir1668-201ENSMUST00000184114 107 ntBASIC13.75□□□□□ -0.21
Pdlim4P70271 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.75□□□□□ -0.21
Pdlim4P70271 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.75□□□□□ -0.21
Pdlim4P70271 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pdlim4P70271 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pdlim4P70271 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.75□□□□□ -0.21
Pdlim4P70271 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim4P70271 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.74□□□□□ -0.21
Pdlim4P70271 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pdlim4P70271 Gm10013-201ENSMUST00000106074 672 ntBASIC13.74□□□□□ -0.21
Pdlim4P70271 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.74□□□□□ -0.21
Pdlim4P70271 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.74□□□□□ -0.21
Pdlim4P70271 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.74□□□□□ -0.21
Pdlim4P70271 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pdlim4P70271 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pdlim4P70271 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pdlim4P70271 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim4P70271 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim4P70271 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms