Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Six5P70178 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Gm11336-201ENSMUST00000118168 334 ntBASIC15.49■□□□□ 0.07
Six5P70178 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.49■□□□□ 0.07
Six5P70178 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.49■□□□□ 0.07
Six5P70178 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Six5P70178 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Six5P70178 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Six5P70178 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.48■□□□□ 0.07
Six5P70178 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.48■□□□□ 0.07
Six5P70178 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.48■□□□□ 0.07
Six5P70178 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.48■□□□□ 0.07
Six5P70178 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Six5P70178 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Gm29707-201ENSMUST00000196325 491 ntBASIC15.48■□□□□ 0.07
Six5P70178 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Six5P70178 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.48■□□□□ 0.07
Six5P70178 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.48■□□□□ 0.07
Six5P70178 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
Six5P70178 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Six5P70178 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.48■□□□□ 0.07
Six5P70178 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Six5P70178 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.47■□□□□ 0.07
Six5P70178 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Six5P70178 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Six5P70178 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.47■□□□□ 0.07
Six5P70178 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Six5P70178 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Six5P70178 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Six5P70178 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Six5P70178 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.47■□□□□ 0.07
Six5P70178 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Six5P70178 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.47■□□□□ 0.07
Six5P70178 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.47■□□□□ 0.07
Six5P70178 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Six5P70178 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six5P70178 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six5P70178 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Six5P70178 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six5P70178 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
Six5P70178 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six5P70178 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Six5P70178 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six5P70178 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Six5P70178 Mir7071-201ENSMUST00000184847 69 ntBASIC15.46■□□□□ 0.07
Six5P70178 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Six5P70178 Gm18421-201ENSMUST00000204122 625 ntBASIC15.46■□□□□ 0.07
Six5P70178 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Six5P70178 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms