Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Hmgb1P63158 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.18■□□□□ 0.5
Hmgb1P63158 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.18■□□□□ 0.5
Hmgb1P63158 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.18■□□□□ 0.5
Hmgb1P63158 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Hmgb1P63158 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hmgb1P63158 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgb1P63158 Gm37437-201ENSMUST00000194451 1937 ntBASIC18.17■□□□□ 0.5
Hmgb1P63158 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgb1P63158 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.17■□□□□ 0.5
Hmgb1P63158 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Hmgb1P63158 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgb1P63158 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC18.17■□□□□ 0.5
Hmgb1P63158 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgb1P63158 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgb1P63158 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.17■□□□□ 0.5
Hmgb1P63158 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgb1P63158 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Hmgb1P63158 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgb1P63158 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgb1P63158 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgb1P63158 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgb1P63158 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgb1P63158 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgb1P63158 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgb1P63158 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.17■□□□□ 0.5
Hmgb1P63158 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.16■□□□□ 0.5
Hmgb1P63158 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgb1P63158 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hmgb1P63158 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgb1P63158 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgb1P63158 Gm13186-201ENSMUST00000118031 316 ntBASIC18.16■□□□□ 0.5
Hmgb1P63158 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.16■□□□□ 0.5
Hmgb1P63158 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgb1P63158 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Hmgb1P63158 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.16■□□□□ 0.5
Hmgb1P63158 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hmgb1P63158 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hmgb1P63158 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hmgb1P63158 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Hmgb1P63158 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgb1P63158 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgb1P63158 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgb1P63158 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgb1P63158 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgb1P63158 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Hmgb1P63158 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgb1P63158 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgb1P63158 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgb1P63158 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hmgb1P63158 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgb1P63158 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hmgb1P63158 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgb1P63158 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgb1P63158 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.15■□□□□ 0.5
Hmgb1P63158 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgb1P63158 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Hmgb1P63158 Actl10-202ENSMUST00000226583 1501 ntBASIC18.15■□□□□ 0.5
Hmgb1P63158 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgb1P63158 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.15■□□□□ 0.5
Hmgb1P63158 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.15■□□□□ 0.5
Hmgb1P63158 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgb1P63158 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgb1P63158 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgb1P63158 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgb1P63158 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgb1P63158 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.15■□□□□ 0.5
Hmgb1P63158 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Hmgb1P63158 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgb1P63158 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.14■□□□□ 0.5
Hmgb1P63158 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Hmgb1P63158 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.14■□□□□ 0.5
Hmgb1P63158 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Hmgb1P63158 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.14■□□□□ 0.49
Hmgb1P63158 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
Hmgb1P63158 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgb1P63158 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgb1P63158 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.14■□□□□ 0.49
Hmgb1P63158 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.14■□□□□ 0.49
Hmgb1P63158 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgb1P63158 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgb1P63158 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgb1P63158 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgb1P63158 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms