Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.42■□□□□ 0.38
NcanP55066 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.42■□□□□ 0.38
NcanP55066 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NcanP55066 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.42■□□□□ 0.38
NcanP55066 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
NcanP55066 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NcanP55066 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NcanP55066 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NcanP55066 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NcanP55066 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NcanP55066 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NcanP55066 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NcanP55066 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NcanP55066 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NcanP55066 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NcanP55066 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NcanP55066 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.41■□□□□ 0.38
NcanP55066 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NcanP55066 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.41■□□□□ 0.38
NcanP55066 Gm27646-201ENSMUST00000183989 110 ntBASIC17.41■□□□□ 0.38
NcanP55066 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.41■□□□□ 0.38
NcanP55066 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NcanP55066 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NcanP55066 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NcanP55066 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NcanP55066 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NcanP55066 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NcanP55066 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NcanP55066 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.41■□□□□ 0.38
NcanP55066 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.41■□□□□ 0.38
NcanP55066 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NcanP55066 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NcanP55066 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NcanP55066 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NcanP55066 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NcanP55066 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NcanP55066 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NcanP55066 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NcanP55066 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NcanP55066 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.4■□□□□ 0.38
NcanP55066 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.4■□□□□ 0.38
NcanP55066 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NcanP55066 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.4■□□□□ 0.38
NcanP55066 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NcanP55066 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.4■□□□□ 0.38
NcanP55066 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.4■□□□□ 0.38
NcanP55066 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NcanP55066 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NcanP55066 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.4■□□□□ 0.38
NcanP55066 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NcanP55066 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
NcanP55066 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NcanP55066 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NcanP55066 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NcanP55066 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NcanP55066 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.39■□□□□ 0.37
NcanP55066 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NcanP55066 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.39■□□□□ 0.37
NcanP55066 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.39■□□□□ 0.37
NcanP55066 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NcanP55066 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NcanP55066 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
NcanP55066 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.39■□□□□ 0.37
NcanP55066 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NcanP55066 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NcanP55066 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NcanP55066 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NcanP55066 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NcanP55066 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
NcanP55066 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.39■□□□□ 0.37
NcanP55066 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NcanP55066 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NcanP55066 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NcanP55066 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NcanP55066 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NcanP55066 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NcanP55066 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NcanP55066 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NcanP55066 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NcanP55066 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NcanP55066 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NcanP55066 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NcanP55066 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NcanP55066 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.38■□□□□ 0.37
NcanP55066 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NcanP55066 Gm27300-201ENSMUST00000184085 97 ntBASIC17.38■□□□□ 0.37
NcanP55066 Gm27335-201ENSMUST00000184758 97 ntBASIC17.38■□□□□ 0.37
NcanP55066 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.38■□□□□ 0.37
NcanP55066 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
NcanP55066 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NcanP55066 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NcanP55066 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.38■□□□□ 0.37
NcanP55066 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NcanP55066 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NcanP55066 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NcanP55066 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NcanP55066 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NcanP55066 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NcanP55066 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NcanP55066 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms