Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NrlP54846 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NrlP54846 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NrlP54846 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.6■□□□□ 0.41
NrlP54846 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NrlP54846 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NrlP54846 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NrlP54846 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NrlP54846 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
NrlP54846 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NrlP54846 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NrlP54846 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NrlP54846 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NrlP54846 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
NrlP54846 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NrlP54846 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NrlP54846 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NrlP54846 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NrlP54846 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NrlP54846 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NrlP54846 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.59■□□□□ 0.41
NrlP54846 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NrlP54846 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NrlP54846 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.59■□□□□ 0.41
NrlP54846 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.59■□□□□ 0.41
NrlP54846 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NrlP54846 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NrlP54846 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NrlP54846 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NrlP54846 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
NrlP54846 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NrlP54846 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NrlP54846 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.58■□□□□ 0.4
NrlP54846 Gm12644-201ENSMUST00000119935 606 ntBASIC17.58■□□□□ 0.4
NrlP54846 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NrlP54846 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.58■□□□□ 0.4
NrlP54846 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.58■□□□□ 0.4
NrlP54846 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.58■□□□□ 0.4
NrlP54846 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NrlP54846 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NrlP54846 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NrlP54846 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NrlP54846 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
NrlP54846 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.57■□□□□ 0.4
NrlP54846 Rprl3-201ENSMUST00000157400 290 ntBASIC17.57■□□□□ 0.4
NrlP54846 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NrlP54846 Gm5867-201ENSMUST00000063197 592 ntBASIC17.57■□□□□ 0.4
NrlP54846 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NrlP54846 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.57■□□□□ 0.4
NrlP54846 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NrlP54846 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NrlP54846 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NrlP54846 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NrlP54846 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NrlP54846 Gm13312-201ENSMUST00000119631 718 ntBASIC17.56■□□□□ 0.4
NrlP54846 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NrlP54846 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.56■□□□□ 0.4
NrlP54846 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.56■□□□□ 0.4
NrlP54846 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NrlP54846 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NrlP54846 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.56■□□□□ 0.4
NrlP54846 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.56■□□□□ 0.4
NrlP54846 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NrlP54846 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NrlP54846 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.56■□□□□ 0.4
NrlP54846 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NrlP54846 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NrlP54846 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NrlP54846 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.56■□□□□ 0.4
NrlP54846 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.56■□□□□ 0.4
NrlP54846 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NrlP54846 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NrlP54846 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NrlP54846 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NrlP54846 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NrlP54846 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NrlP54846 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NrlP54846 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NrlP54846 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NrlP54846 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NrlP54846 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NrlP54846 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NrlP54846 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.55■□□□□ 0.4
NrlP54846 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NrlP54846 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms