Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx3P48381 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx3P48381 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx3P48381 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx3P48381 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.96□□□□□ -0.01
Rfx3P48381 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.96□□□□□ -0.01
Rfx3P48381 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx3P48381 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rfx3P48381 Gm9731-201ENSMUST00000209480 747 ntBASIC14.96□□□□□ -0.01
Rfx3P48381 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.96□□□□□ -0.01
Rfx3P48381 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx3P48381 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.96□□□□□ -0.01
Rfx3P48381 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx3P48381 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx3P48381 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
Rfx3P48381 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx3P48381 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx3P48381 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx3P48381 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx3P48381 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx3P48381 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx3P48381 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Rfx3P48381 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx3P48381 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx3P48381 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx3P48381 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rfx3P48381 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rfx3P48381 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.95□□□□□ -0.02
Rfx3P48381 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx3P48381 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx3P48381 Gm7638-201ENSMUST00000121348 967 ntBASIC14.95□□□□□ -0.02
Rfx3P48381 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.95□□□□□ -0.02
Rfx3P48381 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.95□□□□□ -0.02
Rfx3P48381 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx3P48381 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx3P48381 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx3P48381 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rfx3P48381 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rfx3P48381 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx3P48381 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx3P48381 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.95□□□□□ -0.02
Rfx3P48381 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Rfx3P48381 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx3P48381 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Rfx3P48381 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.94□□□□□ -0.02
Rfx3P48381 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.94□□□□□ -0.02
Rfx3P48381 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.94□□□□□ -0.02
Rfx3P48381 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.94□□□□□ -0.02
Rfx3P48381 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.94□□□□□ -0.02
Rfx3P48381 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Rfx3P48381 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx3P48381 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rfx3P48381 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rfx3P48381 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.93□□□□□ -0.02
Rfx3P48381 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.93□□□□□ -0.02
Rfx3P48381 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Rfx3P48381 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfx3P48381 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.93□□□□□ -0.02
Rfx3P48381 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfx3P48381 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rfx3P48381 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfx3P48381 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfx3P48381 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rfx3P48381 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.92□□□□□ -0.02
Rfx3P48381 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms