Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TgfaP48030 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TgfaP48030 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TgfaP48030 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.35□□□□□ -0.11
TgfaP48030 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TgfaP48030 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TgfaP48030 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TgfaP48030 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TgfaP48030 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TgfaP48030 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.34□□□□□ -0.11
TgfaP48030 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TgfaP48030 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.34□□□□□ -0.11
TgfaP48030 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TgfaP48030 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TgfaP48030 Gm13418-201ENSMUST00000119097 944 ntBASIC14.34□□□□□ -0.11
TgfaP48030 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TgfaP48030 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.34□□□□□ -0.11
TgfaP48030 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.34□□□□□ -0.11
TgfaP48030 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TgfaP48030 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TgfaP48030 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TgfaP48030 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TgfaP48030 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TgfaP48030 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TgfaP48030 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TgfaP48030 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TgfaP48030 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TgfaP48030 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TgfaP48030 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TgfaP48030 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
TgfaP48030 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TgfaP48030 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
TgfaP48030 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.33□□□□□ -0.12
TgfaP48030 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TgfaP48030 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.33□□□□□ -0.12
TgfaP48030 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.33□□□□□ -0.12
TgfaP48030 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TgfaP48030 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
TgfaP48030 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TgfaP48030 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.33□□□□□ -0.12
TgfaP48030 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TgfaP48030 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TgfaP48030 Gm15590-201ENSMUST00000078419 552 ntBASIC14.33□□□□□ -0.12
TgfaP48030 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TgfaP48030 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TgfaP48030 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TgfaP48030 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TgfaP48030 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TgfaP48030 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TgfaP48030 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TgfaP48030 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TgfaP48030 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TgfaP48030 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.32□□□□□ -0.12
TgfaP48030 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TgfaP48030 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.32□□□□□ -0.12
TgfaP48030 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TgfaP48030 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TgfaP48030 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TgfaP48030 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TgfaP48030 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TgfaP48030 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TgfaP48030 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.32□□□□□ -0.12
TgfaP48030 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.32□□□□□ -0.12
TgfaP48030 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TgfaP48030 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TgfaP48030 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.32□□□□□ -0.12
TgfaP48030 Gm7506-201ENSMUST00000207758 815 ntBASIC14.32□□□□□ -0.12
TgfaP48030 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TgfaP48030 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TgfaP48030 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TgfaP48030 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TgfaP48030 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TgfaP48030 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TgfaP48030 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TgfaP48030 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TgfaP48030 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.31□□□□□ -0.12
TgfaP48030 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.31□□□□□ -0.12
TgfaP48030 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.31□□□□□ -0.12
TgfaP48030 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TgfaP48030 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
TgfaP48030 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
TgfaP48030 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.31□□□□□ -0.12
TgfaP48030 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TgfaP48030 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TgfaP48030 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TgfaP48030 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.31□□□□□ -0.12
TgfaP48030 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TgfaP48030 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TgfaP48030 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TgfaP48030 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TgfaP48030 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TgfaP48030 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TgfaP48030 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms