Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Xcl1P47993 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.84□□□□□ -0.67
Xcl1P47993 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Xcl1P47993 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.83□□□□□ -0.67
Xcl1P47993 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.83□□□□□ -0.68
Xcl1P47993 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC10.83□□□□□ -0.68
Xcl1P47993 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Xcl1P47993 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Xcl1P47993 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Xcl1P47993 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Xcl1P47993 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC10.83□□□□□ -0.68
Xcl1P47993 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC10.82□□□□□ -0.68
Xcl1P47993 Gm45760-201ENSMUST00000212190 1782 ntBASIC10.82□□□□□ -0.68
Xcl1P47993 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Gm10167-201ENSMUST00000150411 1479 ntBASIC10.82□□□□□ -0.68
Xcl1P47993 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC10.82□□□□□ -0.68
Xcl1P47993 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC10.82□□□□□ -0.68
Xcl1P47993 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Xcl1P47993 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Gm29340-201ENSMUST00000188763 3854 ntBASIC10.82□□□□□ -0.68
Xcl1P47993 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Xcl1P47993 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC10.82□□□□□ -0.68
Xcl1P47993 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Xcl1P47993 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Xcl1P47993 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Xcl1P47993 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Gm10420-201ENSMUST00000121713 882 ntBASIC10.81□□□□□ -0.68
Xcl1P47993 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC10.81□□□□□ -0.68
Xcl1P47993 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC10.81□□□□□ -0.68
Xcl1P47993 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Xcl1P47993 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Xcl1P47993 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Xcl1P47993 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC10.81□□□□□ -0.68
Xcl1P47993 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Xcl1P47993 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Xcl1P47993 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Xcl1P47993 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Xcl1P47993 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Xcl1P47993 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms