Protein–RNA interactions for Protein: P35428

Hes1, Transcription factor HES-1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes1P35428 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hes1P35428 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hes1P35428 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hes1P35428 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hes1P35428 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hes1P35428 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hes1P35428 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hes1P35428 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Hes1P35428 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Hes1P35428 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Hes1P35428 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.67□□□□□ -0.22
Hes1P35428 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.67□□□□□ -0.22
Hes1P35428 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.67□□□□□ -0.22
Hes1P35428 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hes1P35428 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hes1P35428 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hes1P35428 Dancr-204ENSMUST00000132389 2347 ntBASIC13.67□□□□□ -0.22
Hes1P35428 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hes1P35428 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Hes1P35428 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hes1P35428 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Hes1P35428 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.66□□□□□ -0.22
Hes1P35428 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.66□□□□□ -0.22
Hes1P35428 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hes1P35428 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Hes1P35428 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Hes1P35428 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hes1P35428 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.65□□□□□ -0.22
Hes1P35428 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Hes1P35428 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Hes1P35428 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hes1P35428 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Hes1P35428 Gm2274-201ENSMUST00000184539 609 ntBASIC13.65□□□□□ -0.22
Hes1P35428 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hes1P35428 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Hes1P35428 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hes1P35428 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hes1P35428 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hes1P35428 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hes1P35428 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hes1P35428 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hes1P35428 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hes1P35428 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Hes1P35428 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hes1P35428 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hes1P35428 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.64□□□□□ -0.23
Hes1P35428 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hes1P35428 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms