Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.73■□□□□ 0.11
Slc6a11P31650 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc6a11P31650 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Slc6a11P31650 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Slc6a11P31650 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc6a11P31650 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.72■□□□□ 0.11
Slc6a11P31650 Gm3375-201ENSMUST00000203929 796 ntBASIC15.72■□□□□ 0.11
Slc6a11P31650 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Slc6a11P31650 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Slc6a11P31650 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.72■□□□□ 0.11
Slc6a11P31650 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc6a11P31650 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc6a11P31650 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Slc6a11P31650 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a11P31650 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a11P31650 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a11P31650 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a11P31650 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a11P31650 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a11P31650 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a11P31650 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Slc6a11P31650 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
Slc6a11P31650 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a11P31650 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a11P31650 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Slc6a11P31650 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Slc6a11P31650 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.71■□□□□ 0.11
Slc6a11P31650 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a11P31650 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Slc6a11P31650 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Slc6a11P31650 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a11P31650 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.71■□□□□ 0.11
Slc6a11P31650 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a11P31650 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Slc6a11P31650 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc6a11P31650 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc6a11P31650 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Slc6a11P31650 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a11P31650 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.7■□□□□ 0.1
Slc6a11P31650 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a11P31650 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a11P31650 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Slc6a11P31650 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.7■□□□□ 0.1
Slc6a11P31650 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a11P31650 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.7■□□□□ 0.1
Slc6a11P31650 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Slc6a11P31650 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a11P31650 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.7■□□□□ 0.1
Slc6a11P31650 Gm23634-201ENSMUST00000175071 91 ntBASIC15.7■□□□□ 0.1
Slc6a11P31650 Gm18959-201ENSMUST00000208954 655 ntBASIC15.7■□□□□ 0.1
Slc6a11P31650 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a11P31650 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a11P31650 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a11P31650 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a11P31650 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a11P31650 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a11P31650 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a11P31650 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.7■□□□□ 0.1
Slc6a11P31650 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a11P31650 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Slc6a11P31650 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a11P31650 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc6a11P31650 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Slc6a11P31650 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.69■□□□□ 0.1
Slc6a11P31650 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Slc6a11P31650 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Slc6a11P31650 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.69■□□□□ 0.1
Slc6a11P31650 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.69■□□□□ 0.1
Slc6a11P31650 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc6a11P31650 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms