Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pde6aP27664 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6aP27664 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pde6aP27664 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.2■□□□□ 0.66
Pde6aP27664 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6aP27664 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pde6aP27664 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Pde6aP27664 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.19■□□□□ 0.66
Pde6aP27664 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6aP27664 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6aP27664 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6aP27664 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pde6aP27664 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6aP27664 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6aP27664 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6aP27664 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.18■□□□□ 0.66
Pde6aP27664 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.18■□□□□ 0.66
Pde6aP27664 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6aP27664 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6aP27664 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6aP27664 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.18■□□□□ 0.66
Pde6aP27664 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6aP27664 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pde6aP27664 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6aP27664 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6aP27664 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Pde6aP27664 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.18■□□□□ 0.66
Pde6aP27664 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6aP27664 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6aP27664 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6aP27664 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6aP27664 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6aP27664 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6aP27664 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6aP27664 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6aP27664 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6aP27664 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.17■□□□□ 0.66
Pde6aP27664 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6aP27664 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6aP27664 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6aP27664 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6aP27664 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pde6aP27664 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6aP27664 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pde6aP27664 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6aP27664 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6aP27664 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.16■□□□□ 0.66
Pde6aP27664 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
Pde6aP27664 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6aP27664 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6aP27664 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6aP27664 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6aP27664 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6aP27664 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.15■□□□□ 0.66
Pde6aP27664 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pde6aP27664 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.15■□□□□ 0.66
Pde6aP27664 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.15■□□□□ 0.66
Pde6aP27664 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Pde6aP27664 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6aP27664 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Pde6aP27664 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms