Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col8a2P25318 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a2P25318 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.81□□□□□ -0.2
Col8a2P25318 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Col8a2P25318 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a2P25318 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Col8a2P25318 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Col8a2P25318 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.81□□□□□ -0.2
Col8a2P25318 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.81□□□□□ -0.2
Col8a2P25318 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a2P25318 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a2P25318 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.81□□□□□ -0.2
Col8a2P25318 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a2P25318 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.81□□□□□ -0.2
Col8a2P25318 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a2P25318 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a2P25318 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col8a2P25318 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Col8a2P25318 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a2P25318 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a2P25318 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a2P25318 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a2P25318 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a2P25318 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col8a2P25318 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Col8a2P25318 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.8□□□□□ -0.2
Col8a2P25318 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Mir3081-201ENSMUST00000175305 84 ntBASIC13.8□□□□□ -0.2
Col8a2P25318 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.8□□□□□ -0.2
Col8a2P25318 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col8a2P25318 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.8□□□□□ -0.2
Col8a2P25318 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col8a2P25318 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.79□□□□□ -0.2
Col8a2P25318 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.79□□□□□ -0.2
Col8a2P25318 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col8a2P25318 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col8a2P25318 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col8a2P25318 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col8a2P25318 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col8a2P25318 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col8a2P25318 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col8a2P25318 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col8a2P25318 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Col8a2P25318 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.78□□□□□ -0.2
Col8a2P25318 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col8a2P25318 Gm17971-201ENSMUST00000190239 806 ntBASIC13.78□□□□□ -0.2
Col8a2P25318 Gm29707-201ENSMUST00000196325 491 ntBASIC13.78□□□□□ -0.2
Col8a2P25318 Gm45328-201ENSMUST00000210942 917 ntBASIC13.78□□□□□ -0.2
Col8a2P25318 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col8a2P25318 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col8a2P25318 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col8a2P25318 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col8a2P25318 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.78□□□□□ -0.2
Col8a2P25318 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.78□□□□□ -0.2
Col8a2P25318 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col8a2P25318 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Col8a2P25318 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col8a2P25318 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Col8a2P25318 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a2P25318 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a2P25318 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a2P25318 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Col8a2P25318 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a2P25318 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a2P25318 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a2P25318 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Col8a2P25318 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a2P25318 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a2P25318 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms