Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.75■□□□□ 0.43
Aldh1a1P24549 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Aldh1a1P24549 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.74■□□□□ 0.43
Aldh1a1P24549 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Aldh1a1P24549 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Aldh1a1P24549 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Aldh1a1P24549 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aldh1a1P24549 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.73■□□□□ 0.43
Aldh1a1P24549 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Aldh1a1P24549 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Aldh1a1P24549 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Aldh1a1P24549 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Aldh1a1P24549 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Aldh1a1P24549 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Aldh1a1P24549 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Aldh1a1P24549 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.71■□□□□ 0.43
Aldh1a1P24549 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Aldh1a1P24549 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.71■□□□□ 0.43
Aldh1a1P24549 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.71■□□□□ 0.43
Aldh1a1P24549 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.71■□□□□ 0.43
Aldh1a1P24549 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.71■□□□□ 0.43
Aldh1a1P24549 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Aldh1a1P24549 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Aldh1a1P24549 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Aldh1a1P24549 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Aldh1a1P24549 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Aldh1a1P24549 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Aldh1a1P24549 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Aldh1a1P24549 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Aldh1a1P24549 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Aldh1a1P24549 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Aldh1a1P24549 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Aldh1a1P24549 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.7■□□□□ 0.42
Aldh1a1P24549 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Aldh1a1P24549 Gm7222-201ENSMUST00000117512 906 ntBASIC17.7■□□□□ 0.42
Aldh1a1P24549 Gm13036-201ENSMUST00000117799 748 ntBASIC17.7■□□□□ 0.42
Aldh1a1P24549 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Aldh1a1P24549 Gm8655-201ENSMUST00000221159 852 ntBASIC17.7■□□□□ 0.42
Aldh1a1P24549 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Aldh1a1P24549 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Aldh1a1P24549 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.7■□□□□ 0.42
Aldh1a1P24549 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Aldh1a1P24549 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.7■□□□□ 0.42
Aldh1a1P24549 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Aldh1a1P24549 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms