Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Irf8P23611 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Irf8P23611 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Irf8P23611 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Irf8P23611 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Irf8P23611 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.85■□□□□ 0.45
Irf8P23611 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Irf8P23611 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Irf8P23611 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Irf8P23611 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Irf8P23611 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Irf8P23611 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Irf8P23611 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Irf8P23611 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.84■□□□□ 0.45
Irf8P23611 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Irf8P23611 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Irf8P23611 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Irf8P23611 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Irf8P23611 Gm6623-201ENSMUST00000173570 544 ntBASIC17.84■□□□□ 0.45
Irf8P23611 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Irf8P23611 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Irf8P23611 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Irf8P23611 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Irf8P23611 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Irf8P23611 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Irf8P23611 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Irf8P23611 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Irf8P23611 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.83■□□□□ 0.45
Irf8P23611 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Irf8P23611 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Irf8P23611 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Irf8P23611 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Irf8P23611 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Irf8P23611 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Irf8P23611 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Irf8P23611 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Irf8P23611 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Irf8P23611 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Irf8P23611 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Irf8P23611 Gm11950-201ENSMUST00000121615 838 ntBASIC17.83■□□□□ 0.44
Irf8P23611 Gm29518-201ENSMUST00000190858 372 ntBASIC17.83■□□□□ 0.44
Irf8P23611 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Irf8P23611 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Irf8P23611 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Irf8P23611 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Irf8P23611 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Irf8P23611 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Irf8P23611 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Irf8P23611 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Irf8P23611 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Irf8P23611 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.82■□□□□ 0.44
Irf8P23611 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.82■□□□□ 0.44
Irf8P23611 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Irf8P23611 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Irf8P23611 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Irf8P23611 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Irf8P23611 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Irf8P23611 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Irf8P23611 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Irf8P23611 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Irf8P23611 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Irf8P23611 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Irf8P23611 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Irf8P23611 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Irf8P23611 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Irf8P23611 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Irf8P23611 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Irf8P23611 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Irf8P23611 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Irf8P23611 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Irf8P23611 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Irf8P23611 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Irf8P23611 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Irf8P23611 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Irf8P23611 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Irf8P23611 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Irf8P23611 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Irf8P23611 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.81■□□□□ 0.44
Irf8P23611 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Irf8P23611 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Irf8P23611 Gm17808-201ENSMUST00000200859 894 ntBASIC17.81■□□□□ 0.44
Irf8P23611 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.81■□□□□ 0.44
Irf8P23611 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Irf8P23611 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Irf8P23611 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Irf8P23611 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Irf8P23611 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Irf8P23611 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Irf8P23611 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.81■□□□□ 0.44
Irf8P23611 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Irf8P23611 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Irf8P23611 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Irf8P23611 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Irf8P23611 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Irf8P23611 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Irf8P23611 Gm7977-201ENSMUST00000193787 748 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms