Protein–RNA interactions for Protein: P06837

Gap43, Neuromodulin, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gap43P06837 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gap43P06837 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gap43P06837 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gap43P06837 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.09■□□□□ 0.33
Gap43P06837 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gap43P06837 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gap43P06837 Rab3c-203ENSMUST00000224180 967 ntBASIC17.09■□□□□ 0.33
Gap43P06837 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gap43P06837 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gap43P06837 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gap43P06837 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.09■□□□□ 0.33
Gap43P06837 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.09■□□□□ 0.33
Gap43P06837 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Gap43P06837 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gap43P06837 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gap43P06837 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gap43P06837 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gap43P06837 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gap43P06837 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gap43P06837 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gap43P06837 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gap43P06837 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gap43P06837 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gap43P06837 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gap43P06837 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Gap43P06837 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gap43P06837 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gap43P06837 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.08■□□□□ 0.32
Gap43P06837 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.08■□□□□ 0.32
Gap43P06837 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.08■□□□□ 0.32
Gap43P06837 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Gap43P06837 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.08■□□□□ 0.32
Gap43P06837 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.08■□□□□ 0.32
Gap43P06837 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gap43P06837 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gap43P06837 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gap43P06837 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Gap43P06837 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gap43P06837 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gap43P06837 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gap43P06837 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gap43P06837 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gap43P06837 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gap43P06837 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gap43P06837 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.07■□□□□ 0.32
Gap43P06837 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Gap43P06837 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.07■□□□□ 0.32
Gap43P06837 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gap43P06837 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gap43P06837 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gap43P06837 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gap43P06837 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gap43P06837 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Gap43P06837 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gap43P06837 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.06■□□□□ 0.32
Gap43P06837 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gap43P06837 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gap43P06837 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Gap43P06837 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gap43P06837 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gap43P06837 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gap43P06837 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Gap43P06837 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gap43P06837 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gap43P06837 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Gap43P06837 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gap43P06837 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gap43P06837 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gap43P06837 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gap43P06837 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gap43P06837 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gap43P06837 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gap43P06837 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gap43P06837 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gap43P06837 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gap43P06837 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gap43P06837 Gm13148-201ENSMUST00000118892 745 ntBASIC17.05■□□□□ 0.32
Gap43P06837 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.05■□□□□ 0.32
Gap43P06837 Gm4974-201ENSMUST00000209974 875 ntBASIC17.05■□□□□ 0.32
Gap43P06837 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.05■□□□□ 0.32
Gap43P06837 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gap43P06837 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gap43P06837 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms