Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.13□□□□□ -0.47
P06328 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
P06328 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
P06328 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.12□□□□□ -0.47
P06328 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
P06328 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.12□□□□□ -0.47
P06328 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.12□□□□□ -0.47
P06328 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
P06328 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
P06328 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06328 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
P06328 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P06328 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
P06328 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.11□□□□□ -0.47
P06328 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P06328 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P06328 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.11□□□□□ -0.47
P06328 Gm10653-202ENSMUST00000139570 835 ntBASIC12.11□□□□□ -0.47
P06328 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Gm7791-201ENSMUST00000219066 539 ntBASIC12.11□□□□□ -0.47
P06328 Timm23-208ENSMUST00000226683 750 ntBASIC12.11□□□□□ -0.47
P06328 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
P06328 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
P06328 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
P06328 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.11□□□□□ -0.47
P06328 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
P06328 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P06328 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06328 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.1□□□□□ -0.47
P06328 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06328 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06328 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
P06328 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06328 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06328 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06328 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P06328 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06328 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06328 Gm20760-201ENSMUST00000179197 648 ntBASIC12.1□□□□□ -0.47
P06328 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
P06328 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.1□□□□□ -0.47
P06328 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06328 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P06328 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P06328 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06328 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P06328 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06328 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06328 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06328 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P06328 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms