Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
P03980 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
P03980 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
P03980 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
P03980 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
P03980 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.82□□□□□ -0.36
P03980 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
P03980 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
P03980 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
P03980 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P03980 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
P03980 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.81□□□□□ -0.36
P03980 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
P03980 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.81□□□□□ -0.36
P03980 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.81□□□□□ -0.36
P03980 Gm12933-201ENSMUST00000120203 872 ntBASIC12.81□□□□□ -0.36
P03980 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.81□□□□□ -0.36
P03980 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.81□□□□□ -0.36
P03980 Gm37025-201ENSMUST00000195159 829 ntBASIC12.81□□□□□ -0.36
P03980 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.81□□□□□ -0.36
P03980 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
P03980 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
P03980 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
P03980 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P03980 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.8□□□□□ -0.36
P03980 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.8□□□□□ -0.36
P03980 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Gm27000-201ENSMUST00000182943 842 ntBASIC12.8□□□□□ -0.36
P03980 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.8□□□□□ -0.36
P03980 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P03980 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms