Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Gm42501-201ENSMUST00000200220 1026 ntBASIC11.74□□□□□ -0.53
Hbb-b1P02088 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.74□□□□□ -0.53
Hbb-b1P02088 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hbb-b1P02088 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Gm5576-201ENSMUST00000075809 1236 ntBASIC11.73□□□□□ -0.53
Hbb-b1P02088 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Hbb-b1P02088 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.72□□□□□ -0.53
Hbb-b1P02088 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Sybu-209ENSMUST00000228639 4113 ntBASIC11.72□□□□□ -0.53
Hbb-b1P02088 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC11.72□□□□□ -0.53
Hbb-b1P02088 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hbb-b1P02088 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hbb-b1P02088 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Hbb-b1P02088 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hbb-b1P02088 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hbb-b1P02088 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
Hbb-b1P02088 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Hbb-b1P02088 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hbb-b1P02088 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms