Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cops6O88545 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.17■□□□□ 0.82
Cops6O88545 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.17■□□□□ 0.82
Cops6O88545 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cops6O88545 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cops6O88545 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cops6O88545 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cops6O88545 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cops6O88545 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cops6O88545 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cops6O88545 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cops6O88545 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cops6O88545 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.16■□□□□ 0.82
Cops6O88545 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.16■□□□□ 0.82
Cops6O88545 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cops6O88545 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.16■□□□□ 0.82
Cops6O88545 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cops6O88545 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cops6O88545 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cops6O88545 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cops6O88545 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cops6O88545 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cops6O88545 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cops6O88545 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Cops6O88545 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cops6O88545 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cops6O88545 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cops6O88545 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Cops6O88545 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cops6O88545 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.15■□□□□ 0.82
Cops6O88545 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cops6O88545 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.15■□□□□ 0.82
Cops6O88545 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.15■□□□□ 0.82
Cops6O88545 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.15■□□□□ 0.82
Cops6O88545 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cops6O88545 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops6O88545 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cops6O88545 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cops6O88545 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cops6O88545 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cops6O88545 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cops6O88545 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cops6O88545 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cops6O88545 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cops6O88545 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cops6O88545 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Cops6O88545 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cops6O88545 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.14■□□□□ 0.81
Cops6O88545 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.14■□□□□ 0.81
Cops6O88545 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.14■□□□□ 0.81
Cops6O88545 Gm2651-201ENSMUST00000203560 838 ntBASIC20.14■□□□□ 0.81
Cops6O88545 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.14■□□□□ 0.81
Cops6O88545 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cops6O88545 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cops6O88545 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.13■□□□□ 0.81
Cops6O88545 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cops6O88545 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cops6O88545 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cops6O88545 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Cops6O88545 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cops6O88545 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Cops6O88545 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cops6O88545 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.13■□□□□ 0.81
Cops6O88545 Gm7506-201ENSMUST00000207758 815 ntBASIC20.13■□□□□ 0.81
Cops6O88545 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cops6O88545 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cops6O88545 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cops6O88545 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cops6O88545 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cops6O88545 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Cops6O88545 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cops6O88545 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cops6O88545 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cops6O88545 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cops6O88545 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.12■□□□□ 0.81
Cops6O88545 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cops6O88545 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cops6O88545 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cops6O88545 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cops6O88545 Gm36967-201ENSMUST00000193814 266 ntBASIC20.12■□□□□ 0.81
Cops6O88545 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cops6O88545 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Cops6O88545 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.12■□□□□ 0.81
Cops6O88545 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cops6O88545 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms