Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Gm7222-201ENSMUST00000117512 906 ntBASIC15.35■□□□□ 0.05
Tnfrsf17O88472 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tnfrsf17O88472 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tnfrsf17O88472 Gm8396-201ENSMUST00000057361 823 ntBASIC15.35■□□□□ 0.05
Tnfrsf17O88472 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.35■□□□□ 0.05
Tnfrsf17O88472 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tnfrsf17O88472 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tnfrsf17O88472 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.35■□□□□ 0.05
Tnfrsf17O88472 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Tnfrsf17O88472 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tnfrsf17O88472 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tnfrsf17O88472 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tnfrsf17O88472 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.35■□□□□ 0.05
Tnfrsf17O88472 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.34■□□□□ 0.05
Tnfrsf17O88472 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnfrsf17O88472 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Tnfrsf17O88472 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnfrsf17O88472 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnfrsf17O88472 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnfrsf17O88472 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnfrsf17O88472 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnfrsf17O88472 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnfrsf17O88472 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tnfrsf17O88472 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tnfrsf17O88472 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tnfrsf17O88472 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Tnfrsf17O88472 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tnfrsf17O88472 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.33■□□□□ 0.04
Tnfrsf17O88472 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf17O88472 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.32■□□□□ 0.04
Tnfrsf17O88472 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 AA543401-201ENSMUST00000164248 1269 ntBASIC15.31■□□□□ 0.04
Tnfrsf17O88472 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf17O88472 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf17O88472 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tnfrsf17O88472 Gm12497-201ENSMUST00000138778 237 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms