Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pja1O55176 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pja1O55176 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pja1O55176 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pja1O55176 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pja1O55176 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pja1O55176 Mir1199-201ENSMUST00000117015 119 ntBASIC17.48■□□□□ 0.39
Pja1O55176 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pja1O55176 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Pja1O55176 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pja1O55176 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pja1O55176 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pja1O55176 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pja1O55176 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pja1O55176 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pja1O55176 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pja1O55176 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pja1O55176 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pja1O55176 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pja1O55176 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pja1O55176 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Pja1O55176 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pja1O55176 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.47■□□□□ 0.39
Pja1O55176 Timm23-208ENSMUST00000226683 750 ntBASIC17.47■□□□□ 0.39
Pja1O55176 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pja1O55176 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pja1O55176 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.47■□□□□ 0.39
Pja1O55176 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pja1O55176 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pja1O55176 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.47■□□□□ 0.39
Pja1O55176 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pja1O55176 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pja1O55176 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.47■□□□□ 0.39
Pja1O55176 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pja1O55176 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pja1O55176 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Pja1O55176 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pja1O55176 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pja1O55176 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.46■□□□□ 0.39
Pja1O55176 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.46■□□□□ 0.39
Pja1O55176 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pja1O55176 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.46■□□□□ 0.39
Pja1O55176 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Pja1O55176 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pja1O55176 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pja1O55176 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pja1O55176 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Pja1O55176 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.45■□□□□ 0.38
Pja1O55176 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.45■□□□□ 0.38
Pja1O55176 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pja1O55176 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.45■□□□□ 0.38
Pja1O55176 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pja1O55176 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pja1O55176 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pja1O55176 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Pja1O55176 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pja1O55176 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pja1O55176 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.44■□□□□ 0.38
Pja1O55176 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pja1O55176 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pja1O55176 Gm10653-202ENSMUST00000139570 835 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms