Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.98□□□□□ -0.17
Cxcl13O55038 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Gm43347-201ENSMUST00000200226 580 ntBASIC13.98□□□□□ -0.17
Cxcl13O55038 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.98□□□□□ -0.17
Cxcl13O55038 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.98□□□□□ -0.17
Cxcl13O55038 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cxcl13O55038 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cxcl13O55038 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl13O55038 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl13O55038 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl13O55038 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl13O55038 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl13O55038 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl13O55038 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl13O55038 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Cxcl13O55038 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl13O55038 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl13O55038 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.97□□□□□ -0.17
Cxcl13O55038 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.97□□□□□ -0.17
Cxcl13O55038 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl13O55038 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.97□□□□□ -0.17
Cxcl13O55038 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.97□□□□□ -0.17
Cxcl13O55038 Gm27459-201ENSMUST00000184860 107 ntBASIC13.97□□□□□ -0.17
Cxcl13O55038 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.97□□□□□ -0.17
Cxcl13O55038 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl13O55038 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.97□□□□□ -0.17
Cxcl13O55038 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl13O55038 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cxcl13O55038 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl13O55038 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl13O55038 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cxcl13O55038 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl13O55038 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl13O55038 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl13O55038 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl13O55038 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl13O55038 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl13O55038 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cxcl13O55038 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.96□□□□□ -0.17
Cxcl13O55038 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl13O55038 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl13O55038 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl13O55038 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl13O55038 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl13O55038 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl13O55038 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl13O55038 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl13O55038 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl13O55038 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl13O55038 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl13O55038 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cxcl13O55038 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl13O55038 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Cxcl13O55038 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.95□□□□□ -0.18
Cxcl13O55038 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cxcl13O55038 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cxcl13O55038 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl13O55038 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl13O55038 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Cxcl13O55038 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl13O55038 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl13O55038 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.95□□□□□ -0.18
Cxcl13O55038 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl13O55038 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl13O55038 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl13O55038 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cxcl13O55038 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl13O55038 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl13O55038 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl13O55038 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cxcl13O55038 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl13O55038 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cxcl13O55038 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl13O55038 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cxcl13O55038 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl13O55038 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl13O55038 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.94□□□□□ -0.18
Cxcl13O55038 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl13O55038 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.94□□□□□ -0.18
Cxcl13O55038 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl13O55038 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cxcl13O55038 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl13O55038 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl13O55038 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl13O55038 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl13O55038 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms