Protein–RNA interactions for Protein: O35739

Klf9, Krueppel-like factor 9, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klf9O35739 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Klf9O35739 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Klf9O35739 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Klf9O35739 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Klf9O35739 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Klf9O35739 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Klf9O35739 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Klf9O35739 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Klf9O35739 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Klf9O35739 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Klf9O35739 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Klf9O35739 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Klf9O35739 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Klf9O35739 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.03□□□□□ -0.16
Klf9O35739 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Klf9O35739 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.03□□□□□ -0.16
Klf9O35739 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Klf9O35739 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.03□□□□□ -0.16
Klf9O35739 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.03□□□□□ -0.16
Klf9O35739 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Klf9O35739 Gm6365-201ENSMUST00000054711 744 ntBASIC14.03□□□□□ -0.16
Klf9O35739 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.03□□□□□ -0.16
Klf9O35739 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Klf9O35739 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Klf9O35739 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Klf9O35739 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Klf9O35739 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Klf9O35739 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Klf9O35739 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Klf9O35739 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Klf9O35739 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Klf9O35739 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Klf9O35739 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Klf9O35739 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Klf9O35739 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Klf9O35739 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Klf9O35739 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.02□□□□□ -0.16
Klf9O35739 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Klf9O35739 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Klf9O35739 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Klf9O35739 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Klf9O35739 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Klf9O35739 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Klf9O35739 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.02□□□□□ -0.17
Klf9O35739 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Klf9O35739 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.02□□□□□ -0.17
Klf9O35739 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Klf9O35739 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Klf9O35739 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Klf9O35739 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Klf9O35739 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Klf9O35739 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Klf9O35739 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Klf9O35739 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Klf9O35739 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Klf9O35739 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Klf9O35739 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Gm2399-201ENSMUST00000104944 225 ntBASIC14.01□□□□□ -0.17
Klf9O35739 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Klf9O35739 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.01□□□□□ -0.17
Klf9O35739 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.01□□□□□ -0.17
Klf9O35739 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Klf9O35739 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Klf9O35739 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.01□□□□□ -0.17
Klf9O35739 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Klf9O35739 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.01□□□□□ -0.17
Klf9O35739 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Klf9O35739 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14□□□□□ -0.17
Klf9O35739 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Klf9O35739 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Klf9O35739 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14□□□□□ -0.17
Klf9O35739 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14□□□□□ -0.17
Klf9O35739 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Klf9O35739 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Klf9O35739 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Klf9O35739 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Klf9O35739 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Klf9O35739 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Klf9O35739 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Klf9O35739 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14□□□□□ -0.17
Klf9O35739 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Klf9O35739 Mir2861-201ENSMUST00000175539 82 ntBASIC14□□□□□ -0.17
Klf9O35739 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Klf9O35739 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14□□□□□ -0.17
Klf9O35739 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Klf9O35739 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms