Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk2O35491 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk2O35491 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Clk2O35491 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk2O35491 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clk2O35491 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.96■□□□□ 0.47
Clk2O35491 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.96■□□□□ 0.47
Clk2O35491 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk2O35491 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.96■□□□□ 0.47
Clk2O35491 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk2O35491 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk2O35491 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk2O35491 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clk2O35491 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Clk2O35491 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Clk2O35491 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.95■□□□□ 0.46
Clk2O35491 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk2O35491 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk2O35491 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Clk2O35491 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk2O35491 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clk2O35491 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.95■□□□□ 0.46
Clk2O35491 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk2O35491 Gm27459-201ENSMUST00000184860 107 ntBASIC17.95■□□□□ 0.46
Clk2O35491 Gm36967-201ENSMUST00000193814 266 ntBASIC17.95■□□□□ 0.46
Clk2O35491 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.95■□□□□ 0.46
Clk2O35491 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.95■□□□□ 0.46
Clk2O35491 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.95■□□□□ 0.46
Clk2O35491 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.95■□□□□ 0.46
Clk2O35491 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk2O35491 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk2O35491 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clk2O35491 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk2O35491 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk2O35491 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.95■□□□□ 0.46
Clk2O35491 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clk2O35491 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Clk2O35491 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk2O35491 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk2O35491 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk2O35491 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk2O35491 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.94■□□□□ 0.46
Clk2O35491 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clk2O35491 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Clk2O35491 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk2O35491 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.94■□□□□ 0.46
Clk2O35491 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clk2O35491 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.94■□□□□ 0.46
Clk2O35491 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Clk2O35491 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.94■□□□□ 0.46
Clk2O35491 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Clk2O35491 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Clk2O35491 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk2O35491 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk2O35491 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clk2O35491 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk2O35491 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clk2O35491 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clk2O35491 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Clk2O35491 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk2O35491 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk2O35491 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk2O35491 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Clk2O35491 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk2O35491 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk2O35491 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.93■□□□□ 0.46
Clk2O35491 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk2O35491 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk2O35491 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.93■□□□□ 0.46
Clk2O35491 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clk2O35491 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk2O35491 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk2O35491 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Clk2O35491 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk2O35491 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Clk2O35491 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clk2O35491 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk2O35491 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Clk2O35491 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Clk2O35491 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clk2O35491 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk2O35491 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk2O35491 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Clk2O35491 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clk2O35491 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk2O35491 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk2O35491 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk2O35491 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clk2O35491 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk2O35491 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.92■□□□□ 0.46
Clk2O35491 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk2O35491 Gm44454-201ENSMUST00000198541 138 ntBASIC17.92■□□□□ 0.46
Clk2O35491 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clk2O35491 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk2O35491 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk2O35491 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk2O35491 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clk2O35491 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Clk2O35491 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clk2O35491 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms