Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Pkd1O08852 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pkd1O08852 Mir7023-201ENSMUST00000185093 64 ntBASIC10.42□□□□□ -0.74
Pkd1O08852 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pkd1O08852 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pkd1O08852 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Pkd1O08852 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pkd1O08852 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
Pkd1O08852 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pkd1O08852 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Pkd1O08852 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pkd1O08852 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pkd1O08852 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pkd1O08852 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pkd1O08852 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pkd1O08852 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pkd1O08852 Gm6858-201ENSMUST00000208582 1468 ntBASIC10.42□□□□□ -0.74
Pkd1O08852 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC10.42□□□□□ -0.74
Pkd1O08852 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pkd1O08852 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Pkd1O08852 Gm45747-201ENSMUST00000212203 999 ntBASIC10.41□□□□□ -0.74
Pkd1O08852 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Gm2423-201ENSMUST00000074863 733 ntBASIC10.41□□□□□ -0.74
Pkd1O08852 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.41□□□□□ -0.74
Pkd1O08852 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.41□□□□□ -0.74
Pkd1O08852 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC10.41□□□□□ -0.74
Pkd1O08852 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC10.41□□□□□ -0.74
Pkd1O08852 Gm45167-201ENSMUST00000208007 322 ntBASIC10.41□□□□□ -0.74
Pkd1O08852 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Pkd1O08852 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Gm44335-201ENSMUST00000196879 141 ntBASIC10.41□□□□□ -0.74
Pkd1O08852 Gm44297-201ENSMUST00000198304 141 ntBASIC10.41□□□□□ -0.74
Pkd1O08852 Gm44346-201ENSMUST00000198851 141 ntBASIC10.41□□□□□ -0.74
Pkd1O08852 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pkd1O08852 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pkd1O08852 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Pkd1O08852 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pkd1O08852 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pkd1O08852 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC10.4□□□□□ -0.74
Pkd1O08852 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pkd1O08852 Gm9172-201ENSMUST00000212092 954 ntBASIC10.4□□□□□ -0.74
Pkd1O08852 Gm5828-201ENSMUST00000071842 1860 ntBASIC10.4□□□□□ -0.74
Pkd1O08852 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Pkd1O08852 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pkd1O08852 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pkd1O08852 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pkd1O08852 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pkd1O08852 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Pkd1O08852 Gm18889-201ENSMUST00000174284 929 ntBASIC10.4□□□□□ -0.75
Pkd1O08852 Gm27301-201ENSMUST00000184012 127 ntBASIC10.4□□□□□ -0.75
Pkd1O08852 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.4□□□□□ -0.75
Pkd1O08852 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.4□□□□□ -0.75
Pkd1O08852 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pkd1O08852 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pkd1O08852 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Pkd1O08852 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pkd1O08852 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC10.4□□□□□ -0.75
Pkd1O08852 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Pkd1O08852 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Gm11424-201ENSMUST00000121929 829 ntBASIC10.39□□□□□ -0.75
Pkd1O08852 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.39□□□□□ -0.75
Pkd1O08852 Gm45612-201ENSMUST00000211320 160 ntBASIC10.39□□□□□ -0.75
Pkd1O08852 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Pkd1O08852 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Pkd1O08852 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Pkd1O08852 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pkd1O08852 Gm5626-201ENSMUST00000222151 1058 ntBASIC10.39□□□□□ -0.75
Pkd1O08852 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms